Co-expression analysis

Gene ID GmaAffx.51654.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g46290: protein kinase, putative (HF=6e-7)
Module size 6 genes
NF 0.56
%ile 87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.83GmaAffx.51654.1.S1_atAW185244--6e-7At3g46290protein kinase, putativeO.I.H.G.S.X.
0.8392.50.81GmaAffx.56822.1.A1_atCD407773--3e+0At2g27280unknown proteinO.I.H.G.S.X.
0.5071.70.88Gma.17236.1.A1_atAW309595--9e-1At4g01480AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)O.I.H.G.S.X.
0.5071.70.92GmaAffx.64725.1.S1_atBM568068--2e-1At4g18060clathrin bindingO.I.H.G.S.X.
0.3650.80.85Gma.5117.1.S1_atBI971048--1e+0At5g03030DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2329.90.88Gma.12826.1.A1_atCD391629--1e+0At2g36485-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.399.7GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
14.999.6GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
14.499.6GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
14.299.6GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
13.499.5GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
12.399.5GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
11.199.4GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
9.099.2GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
7.698.9GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.798.7GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.298.6GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.298.6GSM191090Soybean_Cotyledon_OI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
6.198.5GSM191089Soybean_Cotyledon_OI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.598.3GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.498.2GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.998.0GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.397.5GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.297.4GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.197.3GSM182038Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.197.3GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.197.3GSM191091Soybean_Cotyledon_SEED1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.097.2GSM201119Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.097.2GSM182048Whole Seed at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.097.2GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.997.1GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.997.1GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.897.0GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.696.7GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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