Co-expression analysis

Gene ID	GmaAffx.50792.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g37760: DNAJ heat shock N-terminal domain-containing protein (HF=8e+0)
Module size	8 genes
NF	0.28
%ile	53.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	54.5	0.73	GmaAffx.50792.1.S1_at	BM092504	-	-	8e+0	At5g37760	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.73	Gma.13640.1.A1_at	CD402545	-	-	9e-1	At3g56000	ATCSLA14	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.71	Gma.12570.1.A1_at	CD391560	-	-	3e+0	At5g23660	MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.81	GmaAffx.66589.1.S1_at	BE821501	-	-	1e+0	At5g20470	myosin, putative	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.75	GmaAffx.12927.1.A1_at	BE822855	-	-	7e-1	At2g39855	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.78	GmaAffx.70956.1.S1_at	AW185248	-	-	2e+0	At1g34380	5'-3' exonuclease family protein	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.73	Gma.8939.1.S1_at	BU764070	-	-	9e-1	At1g68240	transcription factor	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.82	GmaAffx.24388.1.A1_at	AW101914	-	-	3e+0	At4g14560	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.2	99.7	GSM191079	Soybean_Cotyledon_ES1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
20.5	99.7	GSM191080	Soybean_Cotyledon_ES2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
19.5	99.7	GSM201130	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
18.4	99.7	GSM182036	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
15.4	99.6	GSM201119	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
12.0	99.4	GSM182035	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
10.4	99.3	GSM201118	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
6.0	98.5	GSM147940	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
5.8	98.4	GSM147941	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
4.4	97.6	GSM147939	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.9	97.1	GSM191077	Soybean_Cotyledon_SUS1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.1	95.8	GSM191078	Soybean_Cotyledon_SUS2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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