Co-expression analysis

Gene ID	GmaAffx.50740.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g55930: OPT1 (OLIGOPEPTIDE TRANSPORTER 1) (HF=1e-8)
Module size	6 genes
NF	0.37
%ile	65.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.90	GmaAffx.50740.1.S1_at	BM085219	-	-	1e-8	At5g55930	OPT1 (OLIGOPEPTIDE TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.96	GmaAffx.74742.1.S1_at	CA785419	-	-	8e-1	At4g19645	-	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.82262.1.S1_at	BI786890	-	-	3e-28	At3g51770	ETO1 (ETHYLENE OVERPRODUCER 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.23963.1.S1_at	BQ080815	-	-	3e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	GmaAffx.83517.1.A1_at	BU550053	-	-	1e+0	At3g17240	mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	GmaAffx.39172.1.S1_at	BM094230	-	-	2e-5	At1g12340	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
33.3	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
29.8	99.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
29.0	99.8	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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