Co-expression analysis

Gene ID GmaAffx.50688.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g67930: Golgi transport complex protein-related (HF=6e-9)
Module size 7 genes
NF 0.04
%ile 17.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8693.00.97GmaAffx.50688.1.S1_atBI972174--6e-9At1g67930Golgi transport complex protein-relatedO.I.H.G.S.X.
0.1316.30.98Gma.5200.4.S1_atBU578182--2e-72At3g08930-O.I.H.G.S.X.
0.0710.20.97GmaAffx.39763.1.S1_atBF066675--5e-11At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.
0.058.00.98Gma.6495.1.S1_atBQ612701--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.047.00.97GmaAffx.63588.1.S1_atBM891921--5e+0At2g21130peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamaseO.I.H.G.S.X.
0.047.00.98Gma.17713.1.S1_atBG156677--1e-63At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeO.I.H.G.S.X.
0.024.50.97Gma.6445.1.S1_atBE210393--2e-30At4g03120proline-rich family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, Ptp.1777.1.S1_at, orthologous to the query gene, GmaAffx.50688.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5078.6Ptp.1777.1.S1_atAt1g67930hypothetical protein-4e-11At1g67930Golgi transport complex protein-relatedO.I.H.G.S.X.
0.5582.2Ptp.6486.1.S1_s_atAt1g67930actin 1-0At1g49240ACT8 (ACTIN 8)O.I.H.G.S.X.
0.5380.5PtpAffx.213732.1.S1_atAt1g67930hypothetical protein-1e-27At1g61670-O.I.H.G.S.X.
0.4471.9PtpAffx.206011.1.S1_s_atAt1g67930hypothetical protein-3e-114At5g10270CDKCO.I.H.G.S.X.
0.4268.6PtpAffx.1258.1.S1_s_atAt1g67930actin 1-5e-138At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.4067.0Ptp.2818.1.S1_atAt1g67930hypothetical protein-2e+0At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3153.7PtpAffx.200412.1.S1_x_atAt1g67930hypothetical protein-0At4g11380beta-adaptin, putativeO.I.H.G.S.X.
0.2543.6PtpAffx.5770.1.S1_s_atAt1g67930hypothetical protein-3e-45At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.
0.2543.6Ptp.1497.2.S1_x_atAt1g67930s-adenosylmethionine synthetase 5-3e-179At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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