Co-expression analysis

Gene ID GmaAffx.49521.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g65780: ATBCAT-5 (HF=1e-19)
Module size 6 genes
NF 0.01
%ile 5.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3853.30.94GmaAffx.49521.2.S1_atBF066739--5e-34At5g65780ATBCAT-5O.I.H.G.S.X. finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X. (Ser/Arg-rich protein 34a)O.I.H.G.S.X. pyrophosphorylase family proteinO.I.H.G.S.X.
-1.40.96Gma.2000.1.S1_atAW309844--3e-21At4g17830peptidase M20/M25/M40 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1617283_at, orthologous to the query gene, GmaAffx.49521.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6081.91617283_atAt5g65780hypothetical LOC100245758-4e-20At3g49680BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.5072.71609392_s_atAt5g65780hypothetical protein LOC100242395-2e-47At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.5072.71620426_atAt5g65780similar to DNA-binding protein-1e-20At1g13960WRKY4O.I.H.G.S.X.
0.4057.71611878_atAt5g65780--2e-2At2g20613unknown proteinO.I.H.G.S.X.
0.3853.61614977_atAt5g65780--2e+1At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.3548.51615365_atAt5g65780hypothetical protein LOC100253158-2e-14At1g54130RSH3 (RELA/SPOT HOMOLOG 3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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