Co-expression analysis

Gene ID GmaAffx.49521.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g65780: ATBCAT-5 (HF=1e-19)
Module size 6 genes
NF 0.01
%ile 5.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3853.30.94GmaAffx.49521.2.S1_atBF066739--5e-34At5g65780ATBCAT-5O.I.H.G.S.X. finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X. (Ser/Arg-rich protein 34a)O.I.H.G.S.X. pyrophosphorylase family proteinO.I.H.G.S.X.
-1.40.96Gma.2000.1.S1_atAW309844--3e-21At4g17830peptidase M20/M25/M40 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g65780, orthologous to the query gene, GmaAffx.49521.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.4862.5At5g65780836707ATBCAT-5encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutantO.I.H.G.S.X.
0.6781.6At1g48420841263D-CDES (D-CYSTEINE DESULFHYDRASE)Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. Unlike homologous bacterial enzymes, it does not have 1-aminocyclopropane-1-carboxylate deaminase activity.O.I.H.G.S.X.
0.5773.8At2g24200816954cytosol aminopeptidaseF:manganese ion binding, metalloexopeptidase activity, aminopeptidase activity;P:response to cadmium ion, proteolysis;C:vacuole;OBMPFAO.I.H.G.S.X.
0.5570.6At4g13430826975IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)F:4 iron, 4 sulfur cluster binding, lyase activity, hydro-lyase activity;P:response to cadmium ion, metabolic process;C:chloroplast stroma, chloroplast;OBFMAPO.I.H.G.S.X.
0.4862.5At4g13360826967catalyticF:catalytic activity;P:metabolic process;C:unknown;BOMFPAO.I.H.G.S.X.
0.3643.6At5g43940834417HOT5 (sensitive to hot temperatures 5)Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.O.I.H.G.S.X.
0.3338.1At1g79870844326oxidoreductase family proteinF:in 6 functions;P:metabolic process;C:unknown;BOFMPAVO.I.H.G.S.X.
0.2624.4At1g78900844228VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.O.I.H.G.S.X.
0.2624.4At3g10920820263MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)manganese superoxide dismutase (MSD1)O.I.H.G.S.X.

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