Co-expression analysis

Gene ID GmaAffx.48833.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g44130: nucellin protein, putative (HF=1e-2)
Module size 13 genes
NF 0.22
%ile 46.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4259.30.94GmaAffx.48833.1.S1_atAW781103--1e-2At1g44130nucellin protein, putativeO.I.H.G.S.X.
0.5071.70.96Gma.1445.3.S1_a_atBE805686--9e-10At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)O.I.H.G.S.X.
0.4766.60.97GmaAffx.72944.1.S1_atBI8928993-ketoacyl-CoA thiolase-7e-7At5g48880PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)O.I.H.G.S.X.
0.4766.60.96GmaAffx.72944.1.S1_x_atBI8928993-ketoacyl-CoA thiolase-7e-7At5g48880PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)O.I.H.G.S.X.
0.3650.80.96GmaAffx.93522.1.S1_s_atCF807271--2e-11At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)O.I.H.G.S.X.
0.3142.20.96GmaAffx.93201.1.S1_atCF807687--1e-1At1g48500JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)O.I.H.G.S.X.
0.3040.40.97GmaAffx.76779.1.S1_atBQ094164--6e-2At5g06750protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.2633.90.97Gma.4269.2.S1_a_atBU083811--8e-17At1g27450APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)O.I.H.G.S.X.
0.2532.60.97GmaAffx.92300.1.S1_s_atCF807658Chorismate synthase-5e-50At1g48850EMB1144 (embryo defective 1144)O.I.H.G.S.X.
0.1822.30.97GmaAffx.44442.1.S1_atBQ741278--2e-2At5g23480DNA bindingO.I.H.G.S.X.
0.1619.70.97GmaAffx.65167.1.S1_atBQ297223--2e-24At1g51760IAR3 (IAA-ALANINE RESISTANT 3)O.I.H.G.S.X.
0.1215.10.97GmaAffx.77900.1.S1_s_atBM139626--4e-37At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.069.00.96GmaAffx.92014.1.S1_s_atCF807739--1e-81At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.396.2GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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