Co-expression analysis

Gene ID	GmaAffx.48085.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g14640: CAM8 (CALMODULIN 8) (HF=3e-16)
Module size	20 genes
NF	0.41
%ile	70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.1	0.91	GmaAffx.48085.1.S1_at	AI973796	-	-	3e-16	At4g14640	CAM8 (CALMODULIN 8)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.94	Gma.1805.1.S1_at	CD395511	-	-	1e-3	At2g20562	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.95	Gma.8961.1.S1_at	BU765186	-	-	2e-1	At5g27130	AGL39 (AGAMOUS LIKE 39)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.95	GmaAffx.58742.2.S1_x_at	BM084972	-	-	2e-4	At2g37960	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.93	GmaAffx.65452.1.S1_at	BI967652	-	-	7e-2	At1g32690	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.94	GmaAffx.58742.2.S1_at	BM084972	-	-	2e-4	At2g37960	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.93	GmaAffx.56383.1.S1_at	BU927173	-	-	2e-1	At3g02690	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.95	Gma.11004.1.S1_at	AW102356	-	-	2e+0	At5g55856	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.95	GmaAffx.20155.1.S1_at	CA819552	-	-	2e+0	At2g18740	small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.92	Gma.8448.1.S1_at	AB083031.1	syringolide-induced protein 13-1-1	-	3e-3	At4g09270	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.94	Gma.1157.1.S1_at	BE820284	-	-	7e-3	At3g03280	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.93	Gma.12031.2.S1_x_at	BU578343	-	-	3e-2	At1g56060	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.93	Gma.12031.2.S1_at	BU578343	-	-	3e-2	At1g56060	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	Gma.15940.1.A1_at	AW397591	-	-	2e-1	At3g25545	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.95	Gma.8411.1.S1_at	BI974616	-	-	1e+0	At5g19855	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.94	GmaAffx.93108.1.S1_s_at	CF808027	-	-	3e-16	At5g22250	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.93	GmaAffx.178.1.S1_at	AW164709	-	-	2e-1	At5g56380	F-box family protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.94	Gma.15724.2.S1_at	AW350291	-	-	6e-16	At5g22250	CCR4-NOT transcription complex protein, putative	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.94	GmaAffx.81783.1.S1_at	AW101961	-	-	2e-10	At5g35580	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.94	Gma.3828.1.S1_at	BE657673	-	-	2e+0	At1g30260	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	98.3	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.5	98.3	GSM292481	79_1257.1G.R164L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM292422	25_1253.1G.R161U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM292469	68_1280.1G.R178P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM292273	18_1177.1E.R109U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM292249	63_1047.1B.R027U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM292425	28_1271.1G.R173U_rerun, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292459	59_1282.1G.R179P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292318	66_1177.1E.R109L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292433	35_1253.1G.R161L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292246	60_1047.1B.R027L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292238	45_1051.1B.R029L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292462	61_1271.1G.R173L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292334	80_1172.1E.R106P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292268	13_1181.1E.R111U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292485	82_1258.1G.R164P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292409	13_1247.1G.R154U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292455	55_C112.1G.R9G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292370	44_1227.1F.R139U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292213	76_1023.1A.R013U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292257	76_C032.1B.V7B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292234	37_1051.1B.R029U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292443	44_1275.1G.R175U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292417	20_1276.1G.R175P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292336	82_1181.1E.R111L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292319	67_1200.1E.R123P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292467	66_C109.1G.V7G1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292447	48_1247.1G.R154L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292415	19_1259.1G.R165U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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