Co-expression analysis

Gene ID	GmaAffx.45437.1.S1_at
Gene name	biotin synthase
Homology with Arabidopsis	Similar to At2g43360: BIO2 (BIOTIN AUXOTROPH 2) (HF=7e-21)
Module size	6 genes
NF	0.04
%ile	16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.97	GmaAffx.45437.1.S1_at	AI960629	biotin synthase	-	7e-21	At2g43360	BIO2 (BIOTIN AUXOTROPH 2)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	GmaAffx.91779.1.S1_at	CF807504	glutamate 1-semialdehyde aminotransferase	-	9e-48	At5g63570	GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.97	GmaAffx.54917.1.S1_at	AW666047	-	-	5e+0	At5g43440	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.97	Gma.13032.1.S1_at	BQ629879	-	-	1e-3	At4g26710	ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.97	GmaAffx.52373.2.S1_at	BM308168	-	-	6e-2	At3g18940	clast3-related	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.97	GmaAffx.53048.1.S1_s_at	AW395589	-	-	2e-14	At1g66070	translation initiation factor-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.151173.1.S1_s_at, orthologous to the query gene, GmaAffx.45437.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	93.6	PtpAffx.151173.1.S1_s_at	At2g43360	hypothetical protein	-	3e-35	At2g43360	BIO2 (BIOTIN AUXOTROPH 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	PtpAffx.107240.1.S1_s_at	At2g43360	hypothetical protein	-	2e-6	At5g22740	ATCSLA02	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	PtpAffx.103517.1.S1_at	At2g43360	hypothetical protein	-	8e-20	At5g18280	ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.54248.1.S1_at	At2g43360	hypothetical protein	-	2e-2	At1g26850	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	PtpAffx.157860.1.S1_at	At2g43360	hypothetical protein	-	5e-1	At5g55150	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	PtpAffx.135584.1.S1_at	At2g43360	hypothetical protein	-	7e-137	At2g42880	ATMPK20	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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