Co-expression analysis

Gene ID GmaAffx.45437.1.S1_at
Gene name biotin synthase
Homology with ArabidopsisSimilar to At2g43360: BIO2 (BIOTIN AUXOTROPH 2) (HF=7e-21)
Module size 6 genes
NF 0.04
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97GmaAffx.45437.1.S1_atAI960629biotin synthase-7e-21At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.
0.4463.30.97GmaAffx.91779.1.S1_atCF807504glutamate 1-semialdehyde aminotransferase-9e-48At5g63570GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE)O.I.H.G.S.X.
0.1721.20.97GmaAffx.54917.1.S1_atAW666047--5e+0At5g434402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X. synthase subunit H family proteinO.I.H.G.S.X. initiation factor-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os08g0540100, orthologous to the query gene, GmaAffx.45437.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.2Os08g0540100At2g43360-Biotin synthase (EC (Biotin synthetase)5e-11At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.
0.4660.9Os07g0110300At2g43360-Adrenodoxin family protein6e-25At4g05450adrenodoxin-like ferredoxin 2O.I.H.G.S.X.
0.2117.9Os03g0645100At2g43360-Pyruvate dehydrogenase E1 beta subunit (Fragment)3e-63At1g30120PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)O.I.H.G.S.X.
0.063.0Os02g0819100At2g43360-Zn-finger, DHHC type domain containing protein7e-7At3g09320zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.063.0Os05g0279600At2g43360-Conserved hypothetical protein3e-9At4g30900-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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