Co-expression analysis

Gene ID GmaAffx.45437.1.S1_at
Gene name biotin synthase
Homology with ArabidopsisSimilar to At2g43360: BIO2 (BIOTIN AUXOTROPH 2) (HF=7e-21)
Module size 6 genes
NF 0.04
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97GmaAffx.45437.1.S1_atAI960629biotin synthase-7e-21At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.
0.4463.30.97GmaAffx.91779.1.S1_atCF807504glutamate 1-semialdehyde aminotransferase-9e-48At5g63570GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE)O.I.H.G.S.X.
0.1721.20.97GmaAffx.54917.1.S1_atAW666047--5e+0At5g434402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.035.80.97Gma.13032.1.S1_atBQ629879--1e-3At4g26710ATP synthase subunit H family proteinO.I.H.G.S.X.
0.024.50.97GmaAffx.52373.2.S1_atBM308168--6e-2At3g18940clast3-relatedO.I.H.G.S.X.
0.024.50.97GmaAffx.53048.1.S1_s_atAW395589--2e-14At1g66070translation initiation factor-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig8787_s_at, orthologous to the query gene, GmaAffx.45437.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7187.1Contig8787_s_atAt2g43360--3e+0At5g11340GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.7187.1HS09F12u_s_atAt2g43360--7e-1At2g33780VQ motif-containing proteinO.I.H.G.S.X.
0.5572.0Contig8788_atAt2g43360--2e+0At3g12630zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.4255.2Contig13809_atAt2g43360--3e-2At2g23420NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.3647.1Contig9449_atAt2g43360--3e-18At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.3647.1Contig13825_atAt2g43360--2e-1At2g32440KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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