Co-expression analysis

Gene ID GmaAffx.45437.1.S1_at
Gene name biotin synthase
Homology with ArabidopsisSimilar to At2g43360: BIO2 (BIOTIN AUXOTROPH 2) (HF=7e-21)
Module size 6 genes
NF 0.04
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97GmaAffx.45437.1.S1_atAI960629biotin synthase-7e-21At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.
0.4463.30.97GmaAffx.91779.1.S1_atCF807504glutamate 1-semialdehyde aminotransferase-9e-48At5g63570GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE)O.I.H.G.S.X.
0.1721.20.97GmaAffx.54917.1.S1_atAW666047--5e+0At5g434402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X. synthase subunit H family proteinO.I.H.G.S.X. initiation factor-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At2g43360, orthologous to the query gene, GmaAffx.45437.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.5065.3At2g43360818937BIO2 (BIOTIN AUXOTROPH 2)Catalyzes the conversion of dethiobiotin to biotin.O.I.H.G.S.X.
0.7888.6At1g34430840346EMB3003 (embryo defective 3003)F:dihydrolipoyllysine-residue acetyltransferase activity, protein binding, acyltransferase activity;P:embryonic development ending in seed dormancy;C:cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope;OBMFPAO.I.H.G.S.X.
0.7083.5At5g35360833497CAC2Encodes biotin carboxylase subunit (CAC2).O.I.H.G.S.X.
0.7083.5At5g46290834671KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,O.I.H.G.S.X.
0.6781.6At2g05990815152MOD1 (MOSAIC DEATH 1)Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.O.I.H.G.S.X.
0.6478.9At3g25860822181LTA2Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.O.I.H.G.S.X.
0.6176.7At1g01090839429PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)pyruvate dehydrogenase E1 alpha subunitO.I.H.G.S.X.
0.5773.8At1g52670841699biotin/lipoyl attachment domain-containing proteinF:binding;P:unknown;C:chloroplast;BOPMO.I.H.G.S.X.
0.5469.5At5g10160830880beta-hydroxyacyl-ACP dehydratase, putativeF:hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast, membrane;BOPMO.I.H.G.S.X.
0.4659.8At1g30120839891PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.O.I.H.G.S.X.

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