Co-expression analysis

Gene ID	GmaAffx.45359.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g28540: CKL6 (CASEIN KINASE I-LIKE 6) (HF=1e-60)
Module size	6 genes
NF	0.31
%ile	57.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	82.9	0.98	GmaAffx.45359.2.S1_at	BQ453165	-	-	1e-60	At4g28540	CKL6 (CASEIN KINASE I-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.4245.5.S1_s_at	BI787772	-	-	3e+0	At1g29962	AGL64 (AGAMOUS-LIKE 64)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.45005.2.S1_at	CA801280	-	-	2e-16	At2g42520	DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.71580.1.S1_at	AW832468	-	-	5e-77	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	GmaAffx.80776.3.S1_at	BF598114	-	-	1e-34	At1g70160	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.98	GmaAffx.39762.1.S1_at	BE209684	-	-	9e-1	At4g37230	oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage