Co-expression analysis

Gene ID	GmaAffx.4467.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g35300: TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) (HF=2e-11)
Module size	7 genes
NF	0.41
%ile	71.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.96	GmaAffx.4467.2.S1_at	BQ452979	-	-	2e-11	At4g35300	TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.97	GmaAffx.93337.1.S1_s_at	CF809062	-	-	1e+0	At4g31130	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	Gma.5327.1.A1_at	AW317220	-	-	2e-24	At2g26640	KCS11 (3-KETOACYL-COA SYNTHASE 11)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.97	GmaAffx.87457.1.S1_at	BM177734	-	-	1e-50	At5g50375	CPI1 (CYCLOPROPYL ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.8846.2.S1_at	BM107812	-	-	6e-15	At5g42420	transporter-related	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.97	GmaAffx.16792.1.S1_at	AI736487	-	-	4e-21	At2g26640	KCS11 (3-KETOACYL-COA SYNTHASE 11)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	Gma.13580.2.S1_x_at	AW780839	tubulin A	-	3e-139	At1g50010	TUA2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.5	GSM238055	Soybean-PS46R-4-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
4.0	97.2	GSM238038	Soybean-Bayfield-2-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
4.0	97.2	GSM238041	Soybean-Bayfield-4-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.9	97.1	GSM238031	Soybean-2601R-3-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.8	97.0	GSM238048	Soybean-Mandarin-3-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.7	96.8	GSM238052	Soybean-PS46R-1-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.4	96.4	GSM245935	Leaf_Water Control_Rep 3_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
3.4	96.4	GSM238054	Soybean-PS46R-3-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.4	96.4	GSM238051	Soybean-Mandarin-7-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.3	96.2	GSM238050	Soybean-Mandarin-6-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.3	96.2	GSM238033	Soybean-2601R-5-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.3	96.2	GSM238047	Soybean-Mandarin-1-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.2	96.0	GSM238060	Soybean-S03W4-4-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.2	96.0	GSM238039	Soybean-Bayfield-3-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.1	95.8	GSM245937	Leaf_LCO treated_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
3.1	95.8	GSM238056	Soybean-PS46R-5-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.0	95.6	GSM238058	Soybean-S03W4-2-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.0	95.6	GSM245938	Leaf_LCO treated_Rep 3_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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