Co-expression analysis

Gene ID GmaAffx.43578.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g08950: electron transport SCO1/SenC family protein (HF=2e-14)
Module size 8 genes
NF 0.19
%ile 41.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7890.60.97GmaAffx.43578.1.S1_atAW119881--2e-14At3g08950electron transport SCO1/SenC family proteinO.I.H.G.S.X.
0.3650.80.98GmaAffx.12915.1.S1_atBE822043--5e-1At5g01910unknown proteinO.I.H.G.S.X.
0.3650.80.98GmaAffx.21224.1.S1_atAW570209--4e+0At3g12180cornichon family proteinO.I.H.G.S.X.
0.3346.10.98GmaAffx.77170.1.S1_atBE440442--1e-7At2g34260transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2025.10.98Gma.2708.1.S1_atAW350781--1e-82At1g30580GTP bindingO.I.H.G.S.X.
0.1417.50.98Gma.13041.1.S1_atCD396718--2e-1At1g02440ATARFD1A (ADP-ribosylation factor D1A)O.I.H.G.S.X.
0.1013.00.98Gma.10509.1.A1_atBI968843--2e-12At4g02030-O.I.H.G.S.X.
0.058.00.98Gma.3950.1.S1_s_atCD393016--7e-16At2g39990EIF2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.9GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.497.6GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
4.497.6GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.397.5GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.297.4GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
3.997.1GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.195.8GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage