Co-expression analysis

Gene ID	GmaAffx.43069.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g14570: UBX domain-containing protein (HF=4e-7)
Module size	6 genes
NF	0.54
%ile	85.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.99	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.99	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1615370_at, orthologous to the query gene, GmaAffx.43069.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	1615370_at	At1g14570	hypothetical protein LOC100266022	-	6e-2	At4g08330	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	1611168_at	At1g14570	hypothetical protein LOC100247366	-	2e-139	At1g50010	TUA2	O.I.	H.G.	S.X.	Please select
0.57	79.8	1614794_at	At1g14570	hypothetical protein LOC100250552	-	1e-30	At4g33400	dem protein-related / defective embryo and meristems protein-related	O.I.	H.G.	S.X.	Please select
0.56	79.4	1611328_at	At1g14570	hypothetical protein LOC100257988	-	3e-57	At3g54560	HTA11	O.I.	H.G.	S.X.	Please select
0.56	79.4	1615089_at	At1g14570	hypothetical protein LOC100260443	-	1e-140	At2g29550	TUB7	O.I.	H.G.	S.X.	Please select
0.53	75.2	1617030_at	At1g14570	hypothetical protein LOC100268070	-	3e-22	At4g32830	AtAUR1 (ATAURORA1)	O.I.	H.G.	S.X.	Please select
0.52	73.9	1607019_at	At1g14570	hypothetical protein LOC100251940	-	3e+0	At2g41420	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	1617668_at	At1g14570	hypothetical protein LOC100243346	-	5e-4	At4g11080	high mobility group (HMG1/2) family protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	1616453_at	At1g14570	hypothetical protein LOC100254782	-	2e-58	At1g76540	CDKB2	O.I.	H.G.	S.X.	Please select
0.40	57.7	1612253_at	At1g14570	hypothetical protein LOC100263987	-	4e+0	At3g61370	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.9	1618654_at	At1g14570	hypothetical protein LOC100259649	-	9e-1	At4g04614	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	1614831_at	At1g14570	hypothetical protein LOC100243109	-	7e-8	At5g48600	ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3)	O.I.	H.G.	S.X.	Please select
0.36	50.7	1620600_at	At1g14570	hypothetical protein LOC100258054	-	4e+0	At3g26800	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	1621574_at	At1g14570	hypothetical protein LOC100241803	-	3e-2	At5g28290	ATNEK3 (NIMA-RELATED KINASE3)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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