Co-expression analysis

Gene ID	GmaAffx.43069.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g14570: UBX domain-containing protein (HF=4e-7)
Module size	6 genes
NF	0.54
%ile	85.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.99	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.99	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, HB20M17r_at, orthologous to the query gene, GmaAffx.43069.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	58.9	HB20M17r_at	At1g14570	-	-	6e-1	At4g36460	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	24.2	Contig23582_at	At1g14570	-	-	7e+0	At4g32380	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	H.G.	S.X.	Please select
0.19	19.6	EBro08_SQ005_G17_at	At1g14570	-	-	2e-1	At5g12236	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	5.8	Contig17642_at	At1g14570	-	-	4e-14	At2g14750	APK (APS KINASE)	O.I.	H.G.	S.X.	Please select
0.06	4.8	HW06L03u_at	At1g14570	-	-	4e+0	At4g37720	ATPSK6 (PHYTOSULFOKINE 6 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.00	0.2	EBro08_SQ004_C01_at	At1g14570	-	-	4e-3	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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