Co-expression analysis

Gene ID GmaAffx.42424.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g19330: armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein (HF=2e-45)
Module size 20 genes
NF 0.32
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8492.60.98GmaAffx.42424.1.S1_atAW756256--2e-45At5g19330armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing proteinO.I.H.G.S.X.
0.4766.60.98Gma.4348.3.S1_atBQ080151--3e-26At2g27230LHW (LONESOME HIGHWAY)O.I.H.G.S.X.
0.4057.10.98GmaAffx.61984.1.S1_atBM523130--4e-9At5g18810SCL28O.I.H.G.S.X.
0.4057.10.98GmaAffx.70422.1.S1_atCA938710--1e+0At1g20010TUB5O.I.H.G.S.X.
0.4057.10.98GmaAffx.15284.1.S1_atBE822730--6e+0At1g21880LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)O.I.H.G.S.X.
0.4057.10.98GmaAffx.82.1.S1_atCD415578--9e-8At3g10210-O.I.H.G.S.X.
0.3853.30.98GmaAffx.82131.1.S1_atBQ473196--2e-2At4g14860atofp11 (Arabidopsis thaliana ovate family protein 11)O.I.H.G.S.X.
0.3346.10.98GmaAffx.22294.1.S1_atAW756376--4e-34At5g18620CHR17 (CHROMATIN REMODELING FACTOR17)O.I.H.G.S.X.
0.3142.20.98GmaAffx.82659.1.S1_atCA784117--2e-11At5g11040-O.I.H.G.S.X.
0.2939.00.98GmaAffx.1876.2.S1_atBG510959--5e-7At3g62980TIR1 (TRANSPORT INHIBITOR RESPONSE 1)O.I.H.G.S.X.
0.2839.00.98GmaAffx.63395.2.S1_s_atBF597240--2e-1At1g49310unknown proteinO.I.H.G.S.X.
0.2735.70.98Gma.6196.2.S1_a_atBI972744--2e-35At2g14120dynamin-like protein 2b (ADL2b)O.I.H.G.S.X.
0.2532.60.98GmaAffx.40750.1.S1_s_atBG352469--8e-1At5g29560calcium ion bindingO.I.H.G.S.X.
0.2532.60.98GmaAffx.22482.1.S1_x_atAW185059--1e-28At3g46460UBC13 (ubiquitin-conjugating enzyme 13)O.I.H.G.S.X.
0.2430.90.98GmaAffx.39895.1.S1_atBE473680--2e-7At2g17790VPS35A (VPS35 HOMOLOG A)O.I.H.G.S.X.
0.2430.90.98Gma.9020.2.S1_atAI736080--1e-14At2g43970La domain-containing proteinO.I.H.G.S.X.
0.2430.90.98Gma.1651.1.S1_atCD395076--4e-1At3g17880ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)O.I.H.G.S.X.
0.2329.90.98GmaAffx.11850.2.S1_atBQ630681--8e-18At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)O.I.H.G.S.X.
0.2228.10.98Gma.15087.1.S1_atBI968833--5e+0At1g01530AGL28 (AGAMOUS-LIKE 28)O.I.H.G.S.X.
0.2126.60.98GmaAffx.56338.1.S1_atBU765079--2e-37At5g13010EMB3011 (embryo defective 3011)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM29413286_3112.2G.R9G1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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