Co-expression analysis

Gene ID	GmaAffx.42271.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g25340: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.00
%ile	3.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.84	GmaAffx.42271.1.S1_at	BQ628705	-	-	4e+0	At5g25340	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.92	Gma.13146.1.S1_at	BM731716	-	-	3e-8	At2g38820	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.93	Gma.13983.1.A1_at	AW101913	-	-	4e-3	At3g54530	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.93	Gma.6238.1.S1_at	BQ612387	-	-	2e+0	At2g39010	PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.92	Gma.5076.1.S1_at	BE657174	-	-	4e-5	At2g41900	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
-	1.4	0.93	Gma.541.1.S1_at	AW156279	-	-	5e-70	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	98.2	GSM201125	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
5.0	98.0	GSM201124	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
4.2	97.4	GSM293215	95_C050.1O.SLO3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM201122	Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.3	96.2	GSM292221	15_C026.1B.SLB2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292245	5_C027.1B.V7B2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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