Co-expression analysis

Gene ID	GmaAffx.41949.2.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g20240: PI (PISTILLATA) (HF=4e-6)
Module size	6 genes
NF	0.01
%ile	6.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.69	GmaAffx.41949.2.S1_s_at	AW733646	-	-	4e-6	At5g20240	PI (PISTILLATA)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.92	HgAffx.22729.2.S1_at	BI749350	-	-	5e-2	At5g38610	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.92	GmaAffx.17950.1.S1_at	BG238408	-	-	2e-1	At2g27410	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.93	HgAffx.19601.1.S1_at	CA939579	-	-	4e+0	At5g51845	-	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.85	GmaAffx.57775.1.S1_s_at	BQ081638	-	-	1e-46	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
-	1.4	0.94	GmaAffx.90612.1.S1_at	CF806337	-	-	2e-14	At5g63470	NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.5	99.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.3	99.3	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.3	98.6	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.0	98.5	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.6	97.7	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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