Co-expression analysis

Gene ID GmaAffx.41945.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g26710: BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1) (HF=8e-7)
Module size 6 genes
NF 0.03
%ile 12.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.91GmaAffx.41945.1.S1_atBM528194--8e-7At2g26710BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1)O.I.H.G.S.X.
0.4463.30.97Gma.12512.1.S1_atCD392421--1e+0At1g11608-O.I.H.G.S.X.
0.4057.10.96HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.2228.10.97GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinO.I.H.G.S.X.
0.013.40.97Gma.8354.1.S1_atBE658968--4e-22At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.013.40.96Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.2376.4.A1_x_at, orthologous to the query gene, GmaAffx.41945.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.2376.4.A1_x_atAt2g26710cortical cell-delineating protein-6e+0At3g24510-O.I.H.G.S.X.
0.8094.0Zm.4190.1.A1_atAt2g26710--9e-31At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.7792.1Zm.3144.1.S1_atAt2g26710nucleic acid binding protein-3e+0At4g20420tapetum-specific protein-relatedO.I.H.G.S.X.
0.7792.1Zm.5290.1.S1_atAt2g26710F-box domain containing protein-4e+0At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.6077.8Zm.3772.1.S1_atAt2g26710Zea m 1 allergen-6e-4At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.5369.1Zm.14040.1.A1_atAt2g26710C-4 methylsterol oxidase-6e-20At4g22756SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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