Co-expression analysis

Gene ID GmaAffx.41945.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g26710: BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1) (HF=8e-7)
Module size 6 genes
NF 0.03
%ile 12.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.91GmaAffx.41945.1.S1_atBM528194--8e-7At2g26710BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1)O.I.H.G.S.X.
0.4463.30.97Gma.12512.1.S1_atCD392421--1e+0At1g11608-O.I.H.G.S.X.
0.4057.10.96HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.2228.10.97GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinO.I.H.G.S.X.
0.013.40.97Gma.8354.1.S1_atBE658968--4e-22At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.013.40.96Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.7GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig25849_at, orthologous to the query gene, GmaAffx.41945.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4458.9Contig25849_atAt2g26710--3e-1At1g51110plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4458.9HB08I12r_atAt2g26710--1e+1At3g30370-O.I.H.G.S.X.
0.1514.1HM02D22r_atAt2g26710--2e+1At5g43070WPP1 (WPP domain protein 1)O.I.H.G.S.X.
0.108.4EBro02_SQ007_M05_atAt2g26710--4e+0At5g42470-O.I.H.G.S.X.
0.097.4Contig20608_atAt2g26710--9e-3At1g76040CPK29O.I.H.G.S.X.
0.011.1HD12A20r_atAt2g26710--1e+0At2g34050-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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