Co-expression analysis

Gene ID GmaAffx.40419.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g03570: - (HF=1e-11)
Module size 6 genes
NF 0.47
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.30.98GmaAffx.40419.1.S1_atBF325410--1e-11At3g03570-O.I.H.G.S.X.
0.6786.10.98GmaAffx.57700.1.S1_atAW781821--8e-20At1g75850VPS35B (VPS35 HOMOLOG B)O.I.H.G.S.X.
0.4360.60.98GmaAffx.76624.1.S1_atCA939046--6e-10At4g31580SRZ-22O.I.H.G.S.X.
0.4057.10.98GmaAffx.91473.1.S1_atCF807198--3e-22At4g28860ckl4 (Casein Kinase I-like 4)O.I.H.G.S.X.
0.3548.60.98GmaAffx.90745.1.S1_s_atCF806470--4e+0At5g42235Expressed proteinO.I.H.G.S.X.
0.2939.00.98GmaAffx.39895.1.S1_atBE473680--2e-7At2g17790VPS35A (VPS35 HOMOLOG A)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM29387729_3084.2E.R9E2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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