Co-expression analysis

Gene ID	GmaAffx.39956.1.A1_s_at
Gene name
Homology with Arabidopsis	Similar to At3g44100: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (HF=1e+1)
Module size	11 genes
NF	0.73
%ile	96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	88.9	0.97	GmaAffx.39956.1.A1_s_at	BE583808	-	-	1e+1	At3g44100	MD-2-related lipid recognition domain-containing protein / ML domain-containing protein	O.I.	H.G.	S.X.	Please select
0.87	93.2	0.98	PsAffx.CL322Contig1_s_at	PsAffx.CL322Contig1	-	-	2e+1	At5g44578	unknown protein	O.I.	H.G.	S.X.	Please select
0.82	91.9	0.98	PsAffx.CL4Contig3_at	PsAffx.CL4Contig3	-	-	7e-1	At5g14590	isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.97	PsAffx.CL809Contig1_at	PsAffx.CL809Contig1	-	-	2e-3	At5g42740	glucose-6-phosphate isomerase, cytosolic (PGIC)	O.I.	H.G.	S.X.	Please select
0.74	89.2	0.97	PsAffx.psMY005iE01r_s_at	PsAffx.psMY005iE01r	-	-	1e-3	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.74	89.2	0.98	PsAffx.CL301Contig1_at	PsAffx.CL301Contig1	-	-	2e+0	At1g77330	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	O.I.	H.G.	S.X.	Please select
0.70	87.1	0.98	PsAffx.CL162Contig1_at	PsAffx.CL162Contig1	-	-	1e+1	At5g46350	WRKY8	O.I.	H.G.	S.X.	Please select
0.69	86.8	0.98	GmaAffx.35357.1.A1_s_at	BE583592	-	-	8e-13	At2g36530	LOS2	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	PsAffx.psMC009xE03f_at	PsAffx.psMC009xE03f	-	-	2e-1	At3g10405	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	PsAffx.CL381Contig1_at	PsAffx.CL381Contig1	-	-	9e-1	At2g43400	ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	PsAffx.CL52Contig1_at	PsAffx.CL52Contig1	-	-	8e-10	At2g36530	LOS2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.6	99.5	GSM171675	28_W.I.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
12.9	99.5	GSM171611	13_W.E.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
11.6	99.4	GSM171619	15_W.F.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.9	99.4	GSM171680	29_Y.F.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.5	99.3	GSM171693	31_Z.I.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.3	99.3	GSM171660	24_Y.I.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.9	99.3	GSM171725	9_Z.F.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.9	99.3	GSM171677	28_Z.E.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.7	99.3	GSM171606	12_V.I.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.3	99.2	GSM171646	21_V.E.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.9	99.2	GSM171664	25_Y.E.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.8	99.1	GSM171634	19_V.F.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.4	99.1	GSM171599	10_W.I.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.7	99.0	GSM171712	6_Y.L.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.7	99.0	GSM171685	2_Z.L.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.5	98.9	GSM171719	8_W.L.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.7	98.7	GSM171710	6_V.L.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.4	98.6	GSM294303	54_3153.2I.R9I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3	98.6	GSM171703	4_W.E.I.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.0	98.5	GSM171656	23_Y.E.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.5	98.3	GSM171671	27_W.E.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.5	98.3	GSM171676	28_Y.I.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.3	98.2	GSM171687	30_W.F.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.2	98.1	GSM294092	4_3111.2G.R9G1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM171641	1_Z.I.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.2	98.1	GSM293113	28_C047.1O.R9O2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM171627	17_W.L.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.9	98.0	GSM171633	18_Y.F.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.9	98.0	GSM171604	11_Y.L.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.7	97.8	GSM171631	18_V.I.M.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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