Co-expression analysis

Gene ID GmaAffx.39875.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g78955: CAMS1 (Camelliol C synthase 1) (HF=1e-31)
Module size 30 genes
NF 0.41
%ile 70.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9093.70.85GmaAffx.39875.1.S1_atBE331706--1e-31At1g78955CAMS1 (Camelliol C synthase 1)O.I.H.G.S.X.
0.7087.10.91GmaAffx.77189.1.S1_atBI787035--1e-31At1g54350ABC transporter family proteinO.I.H.G.S.X.
0.5778.80.91Gma.15490.3.S1_s_atBQ298020--2e-5At1g23730BCA3 (BETA CARBONIC ANHYDRASE 4)O.I.H.G.S.X.
0.5678.20.92Gma.16474.2.S1_atBU090527--2e-45At5g09930ATGCN2O.I.H.G.S.X.
0.5273.10.89GmaAffx.20397.1.A1_atCD408414--1e-2At4g33470hda14 (histone deacetylase 14)O.I.H.G.S.X.
0.5273.10.90Gma.13050.1.S1_atCD394853--3e-8At1g75460ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.5172.30.91GmaAffx.60427.1.S1_atBM271112--4e-9At1g73110ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putativeO.I.H.G.S.X.
0.4968.30.90GmaAffx.74040.1.S1_atBG316398--3e-25At4g36530hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4968.30.90Gma.13330.1.S1_atBM178198--1e-9At5g57040lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.4665.50.93GmaAffx.86250.2.S1_atBI471109--8e-1At3g1358060S ribosomal protein L7 (RPL7D)O.I.H.G.S.X.
0.4463.30.92GmaAffx.23473.2.S1_atBM525801--2e-10At3g27820MDAR4 (MONODEHYDROASCORBATE REDUCTASE 4)O.I.H.G.S.X.
0.4463.30.91GmaAffx.83068.1.S1_atBQ253795--4e+0At3g62510protein disulfide isomerase-relatedO.I.H.G.S.X.
0.4360.60.91GmaAffx.49364.1.S1_atCA939072--8e-1At5g21960AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4360.60.90GmaAffx.76884.1.S1_atAW620343--3e-1At2g28600ATP binding / ATP-dependent helicase/ nucleic acid bindingO.I.H.G.S.X.
0.4057.10.93GmaAffx.24949.1.S1_atAW459517--2e-49At3g24190ABC1 family proteinO.I.H.G.S.X.
0.3954.50.90GmaAffx.84017.1.S1_atBI943454--3e-29At5g13650elongation factor family proteinO.I.H.G.S.X.
0.3751.70.91Gma.14800.2.S1_atBE610029--3e-27At3g07670SET domain-containing proteinO.I.H.G.S.X.
0.3650.80.90GmaAffx.76046.1.S1_atAW761236--9e-11At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.3650.80.93Gma.13225.1.S1_atCD392317--3e-8At5g65840-O.I.H.G.S.X.
0.3650.80.91Gma.10475.1.S1_atBM731634--2e-15At3g17040HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107)O.I.H.G.S.X.
0.3548.60.93Gma.16336.1.S1_atBE659555--1e-22At1g53670MSRB1 (methionine sulfoxide reductase B 1)O.I.H.G.S.X.
0.3548.60.93GmaAffx.29877.1.S1_atBI972919--1e-3At1g05140membrane-associated zinc metalloprotease, putativeO.I.H.G.S.X.
0.3346.10.92Gma.17535.1.S1_atBM178659--3e-11At5g43850ARD4O.I.H.G.S.X.
0.3346.10.92GmaAffx.73357.1.S1_atBM893134--5e-24At5g08650GTP-binding protein LepA, putativeO.I.H.G.S.X.
0.3243.70.93Gma.10458.3.S1_a_atBM178487--6e+0At5g24640unknown proteinO.I.H.G.S.X.
0.3040.40.89GmaAffx.87951.1.S1_atAW760811--2e-8At3g27110peptidase M48 family proteinO.I.H.G.S.X.
0.2939.00.89GmaAffx.85726.1.S1_atAI496042--8e-1At5g02060integral membrane protein, putativeO.I.H.G.S.X.
0.2939.00.89Gma.11134.1.A1_atBG839068--6e-47At1g06690aldo/keto reductase family proteinO.I.H.G.S.X.
0.2228.10.90GmaAffx.78036.2.S1_atBI427469--1e-2At3g05760nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.2126.60.94Gma.6855.1.S1_atCD414500--8e-37At2g25080ATGPX1 (GLUTATHIONE PEROXIDASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.5GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
11.399.4GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
10.299.3GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.999.3GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.799.3GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.599.2GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.099.2GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.099.2GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.999.2GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.899.1GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
8.799.1GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.699.1GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.599.1GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.099.0GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
7.899.0GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
7.498.9GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.898.7GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
6.598.7GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.598.7GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
6.498.6GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.398.6GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.098.5GSM170925V2 Control, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.698.3GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.598.3GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.598.3GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.298.1GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.298.1GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.098.0GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.098.0GSM170929Rust Innoculated, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.998.0GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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