Co-expression analysis

Gene ID GmaAffx.39725.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g57280: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.68
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.90.98GmaAffx.39725.1.S1_atBI945410--8e-1At3g57280unknown proteinO.I.H.G.S.X.
0.9198.60.98Gma.5594.1.S1_atBQ786297--1e-9At3g09840CDC48 (CELL DIVISION CYCLE 48)O.I.H.G.S.X.
0.7388.90.98Gma.14945.1.S1_atBG157566--2e-1At3g12210sequence-specific DNA bindingO.I.H.G.S.X.
0.7388.90.98Gma.7635.1.S1_atAW310136--9e-7At2g41790peptidase M16 family protein / insulinase family proteinO.I.H.G.S.X.
0.5778.80.98GmaAffx.43676.1.S1_atAW234124--8e-7At2g47510FUM1 (FUMARASE 1)O.I.H.G.S.X.
0.3650.80.98GmaAffx.34569.1.S1_s_atAW306183--1e+1Atcg00130-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.097.2GSM29319779_C053.1O.R9O3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29309713_1105.1O.R066L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29227419_C089.1E.R9E3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM182034Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.195.8GSM29332212_1577.1Q.R172L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.9192.1.S1_at, orthologous to the query gene, GmaAffx.39725.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7794.9PtpAffx.9192.1.S1_atAt3g57280hypothetical protein-2e-6At3g57280unknown proteinO.I.H.G.S.X.
0.3661.6PtpAffx.14809.1.S1_atAt3g57280hypothetical protein-8e-9At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.3153.7PtpAffx.5925.1.S1_atAt3g57280hypothetical protein-1e-40At4g30220RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)O.I.H.G.S.X.
0.1729.1Ptp.2678.1.S1_s_atAt3g57280hypothetical protein-5e-78At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.1626.9PtpAffx.18908.2.S1_a_atAt3g57280thioredoxin h-3e-4At3g51030ATTRX1O.I.H.G.S.X.
0.1016.3PtpAffx.11485.4.A1_x_atAt3g57280hypothetical protein-3e-11At3g5634040S ribosomal protein S26 (RPS26C)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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