Co-expression analysis

Gene ID	GmaAffx.39172.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g12340: - (HF=2e-5)
Module size	6 genes
NF	0.64
%ile	92.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	GmaAffx.39172.1.S1_at	BM094230	-	-	2e-5	At1g12340	-	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	GmaAffx.26469.1.S1_at	BE610301	-	-	4e-9	At5g56750	Ndr family protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	GmaAffx.73287.1.S1_at	BI892641	-	-	9e-1	At1g70440	SRO3 (SIMILAR TO RCD ONE 3)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.98	GmaAffx.86740.1.S1_at	BG510614	-	-	6e-3	At2g37940	-	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.99	Gma.18042.1.S1_at	BG725267	-	-	4e-1	At4g00315	F-box family protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.99	GmaAffx.73263.1.S1_at	BI974237	-	-	9e-5	At3g61160	shaggy-related protein kinase beta / ASK-beta (ASK2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
31.6	99.9	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
31.2	99.9	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
31.1	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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