Co-expression analysis

Gene ID GmaAffx.39073.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g12830: auxin-responsive family protein (HF=4e-3)
Module size 17 genes
NF 0.22
%ile 46.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.20.95GmaAffx.39073.1.S1_atAW277379--4e-3At3g12830auxin-responsive family proteinO.I.H.G.S.X.
0.3548.60.98GmaAffx.42424.1.S1_atAW756256--2e-45At5g19330armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing proteinO.I.H.G.S.X.
0.3243.70.97GmaAffx.70093.1.S1_atAW666289--2e-6At4g33210F-box family protein (FBL15)O.I.H.G.S.X.
0.3040.40.97GmaAffx.75978.1.S1_atAW755994--5e-18At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeO.I.H.G.S.X.
0.3040.40.98GmaAffx.84359.1.S1_atBM955089--7e-9At3g55460SCL30O.I.H.G.S.X.
0.2939.00.98GmaAffx.82.1.S1_atCD415578--9e-8At3g10210-O.I.H.G.S.X.
0.2735.70.95GmaAffx.63375.1.S1_atBM520503--4e+0At5g02540short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2025.10.98GmaAffx.75978.3.S1_s_atCA937876--2e-35At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeO.I.H.G.S.X.
0.1822.30.97GmaAffx.60641.1.S1_atBG651330--1e-22At5g23510unknown proteinO.I.H.G.S.X.
0.1721.20.98GmaAffx.82659.1.S1_atCA784117--2e-11At5g11040-O.I.H.G.S.X.
0.1721.20.98Gma.2238.1.S1_atBM893125--4e-76At3g55620emb1624 (embryo defective 1624)O.I.H.G.S.X.
0.1619.70.98Gma.9020.2.S1_atAI736080--1e-14At2g43970La domain-containing proteinO.I.H.G.S.X.
0.1619.70.98GmaAffx.56338.1.S1_atBU765079--2e-37At5g13010EMB3011 (embryo defective 3011)O.I.H.G.S.X.
0.1518.70.98Gma.15407.4.S1_atAW185051--1e-21At5g52040ATRSP41O.I.H.G.S.X.
0.1518.70.97GmaAffx.77186.1.S1_atBM887176--1e-14At3g48195phox (PX) domain-containing proteinO.I.H.G.S.X.
0.1316.30.98Gma.8652.1.A1_atCD407809--3e-1At1g48160signal recognition particle 19 kDa protein, putative / SRP19, putativeO.I.H.G.S.X.
0.0811.00.98GmaAffx.7255.1.S1_atBE657500--3e-8At4g37460SRFR1 (SUPPRESSOR OF RPS4-RLD 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.596.6GSM29413286_3112.2G.R9G1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29276830_C198.1K.R9K3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29405917_3118.2G.R9G2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29306061_C034.1N.R9N3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29282582_C184.1K.R9K1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2941974_3138.2H.R9H2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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