Co-expression analysis

Gene ID GmaAffx.38805.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g44420: PDF1.2 (HF=3e+0)
Module size 6 genes
NF 0.04
%ile 16.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.97GmaAffx.38805.2.S1_atAW099793--3e+0At5g44420PDF1.2O.I.H.G.S.X.
0.5576.30.97GmaAffx.62927.1.S1_atBI972284--2e-4At5g58430ATEXO70B1 (exocyst subunit EXO70 family protein B1)O.I.H.G.S.X.
0.3650.80.97GmaAffx.79145.1.S1_atCA853340--2e-3At5g65630GTE7 (Global transcription factor group E 7)O.I.H.G.S.X.
0.3040.40.97GmaAffx.92617.1.S1_s_atCF807608--2e-2At3g51370protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2735.70.97GmaAffx.90713.1.S1_atCF806438--3e-1At2g38690unknown proteinO.I.H.G.S.X.
0.013.40.97GmaAffx.81793.1.S1_atBM188266--1e-1At1g07520scarecrow transcription factor family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage