Co-expression analysis

Gene ID GmaAffx.3761.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g54980: integral membrane family protein (HF=7e+0)
Module size 6 genes
NF 0.06
%ile 20.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97GmaAffx.3761.1.S1_s_atBF066161--7e+0At5g54980integral membrane family proteinO.I.H.G.S.X.
0.1619.70.95Gma.8007.1.S1_s_atAI856444--2e-3At5g16660unknown proteinO.I.H.G.S.X. import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X. finger (B-box type) family proteinO.I.H.G.S.X. and export factor-binding protein, putativeO.I.H.G.S.X. ATP synthase, putative / V-ATPase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.8736.1.S1_at, orthologous to the query gene, GmaAffx.3761.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4471.9PtpAffx.8736.1.S1_atAt5g54980--1e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.1423.5PtpAffx.212006.1.S1_atAt5g54980--1e-10At5g48720XRI1 (X-RAY INDUCED TRANSCRIPT 1)O.I.H.G.S.X.
0.1118.1PtpAffx.214757.1.S1_atAt5g54980hypothetical protein-6e-1At3g05625bindingO.I.H.G.S.X.
0.1016.3PtpAffx.214817.1.S1_atAt5g54980hypothetical protein-1e-2At5g53860emb2737 (embryo defective 2737)O.I.H.G.S.X.
0.0914.6PtpAffx.42589.1.A1_atAt5g54980hypothetical protein-8e-21At5g25150TAF5 (TBP-ASSOCIATED FACTOR 5)O.I.H.G.S.X.
0.0812.9PtpAffx.212325.1.S1_s_atAt5g54980--4e-1At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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