Co-expression analysis

Gene ID	GmaAffx.3761.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g54980: integral membrane family protein (HF=7e+0)
Module size	6 genes
NF	0.06
%ile	20.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	GmaAffx.3761.1.S1_s_at	BF066161	-	-	7e+0	At5g54980	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.95	Gma.8007.1.S1_s_at	AI856444	-	-	2e-3	At5g16660	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.98	Gma.3535.1.S1_x_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.98	Gma.3535.2.S1_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	GmaAffx.73156.1.S1_at	BM523154	-	-	7e-8	At5g59950	RNA and export factor-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	Gma.17713.1.S1_at	BG156677	-	-	1e-63	At4g32530	vacuolar ATP synthase, putative / V-ATPase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, rbags25e03_at, orthologous to the query gene, GmaAffx.3761.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	rbags25e03_at	At5g54980	-	-	3e+0	At3g26070	plastid-lipid associated protein PAP / fibrillin family protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	Contig9330_at	At5g54980	-	-	5e-2	At5g41190	-	O.I.	H.G.	S.X.	Please select
0.60	77.3	Contig19190_at	At5g54980	-	-	2e-3	At1g59790	cullin-related	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig18671_at	At5g54980	-	-	4e+0	At1g68400	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig24790_at	At5g54980	-	-	4e+0	At2g41440	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig4486_at	At5g54980	-	-	4e-1	At5g16470	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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