Co-expression analysis

Gene ID	GmaAffx.36998.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g25530: DNAJ heat shock protein, putative (HF=1e+1)
Module size	6 genes
NF	0.46
%ile	77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.87	GmaAffx.36998.1.S1_s_at	BM093848	-	-	1e+1	At5g25530	DNAJ heat shock protein, putative	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.89	GmaAffx.91055.1.S1_at	CF806780	-	-	4e-7	At1g66250	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.92	GmaAffx.10143.1.S1_at	BE823422	-	-	7e-10	At5g26850	-	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.87	GmaAffx.4979.1.A1_at	BU549195	-	-	2e-11	At5g51560	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.90	GmaAffx.18722.1.S1_at	AI974052	-	-	4e-1	At1g63090	AtPP2-A11 (Phloem protein 2-A11)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.90	GmaAffx.79294.1.S1_at	CA819683	-	-	3e+0	At5g27820	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	99.1	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
8.4	99.1	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
8.3	99.1	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
8.1	99.0	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
8.0	99.0	GSM184829	Whole Seed at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
8.0	99.0	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.9	99.0	GSM258500	Soybean shoot apical meristem, 6 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.8	99.0	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.7	99.0	GSM191075	Soybean_Cotyledon_EP1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
7.4	98.9	GSM191076	Soybean_Cotyledon_EP2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
7.3	98.9	GSM258505	Soybean shoot apical meristem, 6 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.3	98.9	GSM147955	Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
7.2	98.9	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.2	98.9	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.2	98.9	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
7.1	98.8	GSM182031	Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
7.1	98.8	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.9	98.8	GSM184828	Whole Seed at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
6.9	98.8	GSM201107	Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
6.4	98.6	GSM201104	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
6.3	98.6	GSM147936	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
6.2	98.6	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.2	98.6	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.2	98.6	GSM201105	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
6.1	98.5	GSM147950	Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
5.9	98.5	GSM147956	Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
5.8	98.4	GSM182048	Whole Seed at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
5.8	98.4	GSM201103	Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
5.7	98.4	GSM182029	Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
5.7	98.4	GSM182046	Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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