Co-expression analysis

Gene ID	GmaAffx.36562.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g14970: unknown protein (HF=5e-15)
Module size	6 genes
NF	0.55
%ile	86.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.98	GmaAffx.36562.2.S1_at	BM731207	-	-	5e-15	At1g14970	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	Gma.13878.1.S1_at	CD408791	-	-	5e+0	At5g01070	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.97	GmaAffx.73080.1.S1_at	BI427357	-	-	2e-1	At4g21620	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.97	GmaAffx.73253.1.S1_at	BI786637	-	-	3e-1	At5g56550	OXS3 (OXIDATIVE STRESS 3)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.23963.1.S1_at	BQ080815	-	-	3e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	GmaAffx.39172.1.S1_at	BM094230	-	-	2e-5	At1g12340	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
38.0	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
27.3	99.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
27.1	99.8	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage