Co-expression analysis

Gene ID GmaAffx.31184.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g04590: DNA-binding family protein (HF=3e-6)
Module size 14 genes
NF 0.31
%ile 58.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.60.90GmaAffx.31184.1.A1_atBE820543--3e-6At3g04590DNA-binding family proteinO.I.H.G.S.X.
0.5778.80.94PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinO.I.H.G.S.X.
0.5374.20.94PsAffx.C1023000002_atPsAffx.C1023000002--3e+0At4g21540SPHK1 (SPHINGOSINE KINASE 1)O.I.H.G.S.X.
0.4057.10.98Gma.437.1.S1_s_atCD401627Profilin, PRO2-1e-10At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.3650.80.97GmaAffx.89861.1.S1_s_atCK606562Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.3650.80.97Gma.2534.1.S1_s_atBI967545Ubiquitin-2e-140At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.3650.80.94PsAffx.CL1693Contig1_atPsAffx.CL1693Contig1--6e+0At5g20190bindingO.I.H.G.S.X.
0.3346.10.95HgAffx.18004.1.S1_atCB279764--2e+0At4g13000protein kinase family proteinO.I.H.G.S.X.
0.2735.70.96HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.2532.60.98GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.
0.2329.90.96GmaAffx.10787.1.S1_atBU965232--1e-2At5g16790-O.I.H.G.S.X.
0.2329.90.97Gma.1143.1.A1_atAW278604--4e-6At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.1316.30.97GmaAffx.72876.1.S1_atAI736301WRKY35 protein-5e-13At4g26640WRKY20O.I.H.G.S.X.
0.0811.00.97Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.897.0GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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