Co-expression analysis

Gene ID	GmaAffx.31184.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g04590: DNA-binding family protein (HF=3e-6)
Module size	14 genes
NF	0.31
%ile	58.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.96	99.6	0.90	GmaAffx.31184.1.A1_at	BE820543	-	-	3e-6	At3g04590	DNA-binding family protein	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.94	PsAffx.C122000010_at	PsAffx.C122000010	-	-	6e-1	At4g16240	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.94	PsAffx.C1023000002_at	PsAffx.C1023000002	-	-	3e+0	At4g21540	SPHK1 (SPHINGOSINE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.437.1.S1_s_at	CD401627	Profilin, PRO2	-	1e-10	At2g19760	PRF1 (PROFILIN 1)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	GmaAffx.89861.1.S1_s_at	CK606562	Ubiquitin	-	3e-127	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	Gma.2534.1.S1_s_at	BI967545	Ubiquitin	-	2e-140	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	PsAffx.CL1693Contig1_at	PsAffx.CL1693Contig1	-	-	6e+0	At5g20190	binding	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.95	HgAffx.18004.1.S1_at	CB279764	-	-	2e+0	At4g13000	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.96	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.96	GmaAffx.10787.1.S1_at	BU965232	-	-	1e-2	At5g16790	-	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	Gma.1143.1.A1_at	AW278604	-	-	4e-6	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.97	GmaAffx.72876.1.S1_at	AI736301	WRKY35 protein	-	5e-13	At4g26640	WRKY20	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.97	Gma.6150.2.S1_x_at	CD416056	-	-	1e-23	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	97.0	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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