Co-expression analysis

Gene ID	GmaAffx.29942.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g04870: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.10
%ile	28.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.2	0.97	GmaAffx.29942.1.S1_at	AW567850	-	-	1e+0	At2g04870	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.96	GmaAffx.62630.1.S1_at	BE329740	-	-	9e-1	At5g23035	-	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	GmaAffx.71735.1.S1_at	BI973751	-	-	4e-7	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.96	Gma.1143.1.A1_at	AW278604	-	-	4e-6	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.97	GmaAffx.18005.1.S1_at	BU765846	-	-	2e-13	At4g27630	GTG2 (GPCR-TYPE G PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.96	GmaAffx.45437.1.S1_at	AI960629	biotin synthase	-	7e-21	At2g43360	BIO2 (BIOTIN AUXOTROPH 2)	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	96.0	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294430	85_2455.2J.R220U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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