Co-expression analysis

Gene ID GmaAffx.29942.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g04870: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.10
%ile 28.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.20.97GmaAffx.29942.1.S1_atAW567850--1e+0At2g04870unknown proteinO.I.H.G.S.X.
0.5071.70.96GmaAffx.62630.1.S1_atBE329740--9e-1At5g23035-O.I.H.G.S.X.
0.1518.70.97GmaAffx.71735.1.S1_atBI973751--4e-7At2g45240MAP1A (METHIONINE AMINOPEPTIDASE 1A)O.I.H.G.S.X.
0.0811.00.96Gma.1143.1.A1_atAW278604--4e-6At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.0811.00.97GmaAffx.18005.1.S1_atBU765846--2e-13At4g27630GTG2 (GPCR-TYPE G PROTEIN 2)O.I.H.G.S.X.
0.047.00.96GmaAffx.45437.1.S1_atAI960629biotin synthase-7e-21At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29443085_2455.2J.R220U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.27578.1.S1_at, orthologous to the query gene, GmaAffx.29942.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8894.4TaAffx.27578.1.S1_atAt2g04870--1e+0At4g08570heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.H.G.S.X.
0.4058.4TaAffx.7092.1.S1_s_atAt2g04870--1e+1At5g17130cysteine-type peptidaseO.I.H.G.S.X.
0.2227.1Ta.3591.2.S1_atAt2g04870--7e+0At5g14450GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.1922.4TaAffx.77819.1.S1_atAt2g04870--8e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.1415.8TaAffx.107456.1.S1_atAt2g04870--4e+0At1g20870-O.I.H.G.S.X.
0.1415.8TaAffx.27359.1.S1_atAt2g04870--4e+0At3g09863unknown proteinO.I.H.G.S.X.
0.1314.6TaAffx.85685.1.S1_atAt2g04870--3e+0At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.1213.3Ta.22988.1.S1_atAt2g04870--3e+0At1g70830MLP28 (MLP-LIKE PROTEIN 28)O.I.H.G.S.X.
0.0910.4Ta.20380.1.S1_atAt2g04870--9e-4At3g58040SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)O.I.H.G.S.X.
0.078.6Ta.906.2.A1_atAt2g04870--4e+0At1g29520AWPM-19-like membrane family proteinO.I.H.G.S.X.
0.078.6TaAffx.112556.1.S1_atAt2g04870--4e+0At1g67760ATP binding / protein binding / unfolded protein bindingO.I.H.G.S.X.
0.045.8Ta.5287.1.S1_atAt2g04870--5e-3At2g07640D2,D4-dienoyl-CoA reductase-relatedO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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