Co-expression analysis

Gene ID GmaAffx.29942.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g04870: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.10
%ile 28.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.20.97GmaAffx.29942.1.S1_atAW567850--1e+0At2g04870unknown proteinO.I.H.G.S.X.
0.5071.70.96GmaAffx.62630.1.S1_atBE329740--9e-1At5g23035-O.I.H.G.S.X.
0.1518.70.97GmaAffx.71735.1.S1_atBI973751--4e-7At2g45240MAP1A (METHIONINE AMINOPEPTIDASE 1A)O.I.H.G.S.X.
0.0811.00.96Gma.1143.1.A1_atAW278604--4e-6At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.0811.00.97GmaAffx.18005.1.S1_atBU765846--2e-13At4g27630GTG2 (GPCR-TYPE G PROTEIN 2)O.I.H.G.S.X.
0.047.00.96GmaAffx.45437.1.S1_atAI960629biotin synthase-7e-21At2g43360BIO2 (BIOTIN AUXOTROPH 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29443085_2455.2J.R220U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.69014.1.A1_at, orthologous to the query gene, GmaAffx.29942.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6588.6PtpAffx.69014.1.A1_atAt2g04870histone 2-5e-3At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.S.X.
0.4369.7PtpAffx.5181.1.A1_atAt2g04870--1e-1At5g48515-O.I.H.G.S.X.
0.3762.3PtpAffx.220044.1.S1_atAt2g04870hypothetical protein-5e-1At5g50335unknown proteinO.I.H.G.S.X.
0.3153.7PtpAffx.203574.1.S1_s_atAt2g04870hypothetical protein-2e-3At1g67030ZFP6 (ZINC FINGER PROTEIN 6)O.I.H.G.S.X.
0.3052.0PtpAffx.202840.1.S1_atAt2g04870hypothetical protein-4e+0At5g20020RAN2O.I.H.G.S.X.
0.2950.5PtpAffx.216863.1.S1_atAt2g04870hypothetical protein-4e+0At5g36659-O.I.H.G.S.X.
0.2747.1PtpAffx.214875.1.S1_atAt2g04870hypothetical protein-7e-1At5g44560VPS2.2O.I.H.G.S.X.
0.2340.5PtpAffx.77844.1.S1_atAt2g04870--9e+0At5g05113unknown proteinO.I.H.G.S.X.
0.2340.5Ptp.373.1.A1_atAt2g04870hypothetical protein-4e-1At2g28470BGAL8 (beta-galactosidase 8)O.I.H.G.S.X.
0.2136.5PtpAffx.140892.2.A1_a_atAt2g04870--3e-1At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.H.G.S.X.
0.1830.8Ptp.2282.3.A1_atAt2g04870--2e-4At1g30910molybdenum cofactor sulfurase family proteinO.I.H.G.S.X.
0.1729.1PtpAffx.217578.1.S1_atAt2g04870hypothetical protein-7e-3At1g52540protein kinase, putativeO.I.H.G.S.X.
0.1729.1PtpAffx.218450.1.S1_s_atAt2g04870hypothetical protein-6e+0At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.H.G.S.X.
0.1626.9PtpAffx.88299.1.A1_atAt2g04870--6e+0At3g11810unknown proteinO.I.H.G.S.X.
0.1525.3PtpAffx.15423.1.A1_atAt2g04870sodium proton exchanger-3e-1At3g48030hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1219.6PtpAffx.210677.1.S1_atAt2g04870hypothetical protein-8e-2At5g50790nodulin MtN3 family proteinO.I.H.G.S.X.
0.1118.1PtpAffx.220532.1.S1_atAt2g04870hypothetical protein-4e-1At4g00310EDA8 (EMBRYO SAC DEVELOPMENT ARREST 8)O.I.H.G.S.X.
0.1016.3PtpAffx.211765.1.S1_atAt2g04870--2e-3At1g02910LPA1 (LOW PSII ACCUMULATION1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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