Co-expression analysis

Gene ID	GmaAffx.29692.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g01700: chitinase, putative (HF=3e+0)
Module size	6 genes
NF	0.05
%ile	17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.93	GmaAffx.29692.1.S1_at	AW348396	-	-	3e+0	At4g01700	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.92	GmaAffx.25060.1.S1_at	CD415199	-	-	3e-1	At5g47650	ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.92	GmaAffx.65661.1.S1_at	BI700358	-	-	1e+1	At5g08505	-	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.92	GmaAffx.636.1.S1_at	BM523305	-	-	1e+0	At3g46900	COPT2	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.91	GmaAffx.29692.2.S1_at	AI437572	-	-	8e-1	At1g24260	SEP3 (SEPALLATA3)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.92	Gma.7436.1.S1_at	BU547698	-	-	1e+0	At2g02850	ARPN (PLANTACYANIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.9058.1.A1_at, orthologous to the query gene, GmaAffx.29692.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	95.6	Zm.9058.1.A1_at	At4g01700	-	-	5e+0	At5g61030	GR-RBP3 (glycine-rich RNA-binding protein 3)	O.I.	H.G.	S.X.	Please select
0.91	99.0	Zm.2884.1.S1_at	At4g01700	hypothetical protein LOC100192085	-	1e+1	At5g28420	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	99.0	Zm.9159.1.A1_at	At4g01700	-	-	4e-1	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.80	94.0	Zm.5655.1.A1_at	At4g01700	hypothetical protein LOC100272896	-	1e-8	At2g14910	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	Zm.56.1.S1_at	At4g01700	GTP binding protein2	-	4e-9	At4g34460	AGB1 (GTP BINDING PROTEIN BETA 1)	O.I.	H.G.	S.X.	Please select
0.50	65.7	Zm.6698.1.S1_at	At4g01700	-	-	5e+0	At5g13890	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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