Co-expression analysis

Gene ID	GmaAffx.29692.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g01700: chitinase, putative (HF=3e+0)
Module size	6 genes
NF	0.05
%ile	17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.93	GmaAffx.29692.1.S1_at	AW348396	-	-	3e+0	At4g01700	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.92	GmaAffx.25060.1.S1_at	CD415199	-	-	3e-1	At5g47650	ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.92	GmaAffx.65661.1.S1_at	BI700358	-	-	1e+1	At5g08505	-	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.92	GmaAffx.636.1.S1_at	BM523305	-	-	1e+0	At3g46900	COPT2	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.91	GmaAffx.29692.2.S1_at	AI437572	-	-	8e-1	At1g24260	SEP3 (SEPALLATA3)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.92	Gma.7436.1.S1_at	BU547698	-	-	1e+0	At2g02850	ARPN (PLANTACYANIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.78230.1.A1_at, orthologous to the query gene, GmaAffx.29692.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	PtpAffx.78230.1.A1_at	At4g01700	hypothetical protein	-	7e-12	At4g01700	chitinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	PtpAffx.224549.1.S1_s_at	At4g01700	hypothetical protein	-	8e-3	At1g05250	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	PtpAffx.7936.2.A1_at	At4g01700	-	-	8e-6	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	PtpAffx.225309.1.S1_s_at	At4g01700	hypothetical protein	-	2e-1	At5g39580	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	PtpAffx.86209.1.S1_at	At4g01700	hypothetical protein	-	1e-7	At5g66490	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	PtpAffx.68488.1.A1_at	At4g01700	hypothetical protein	-	8e-2	At2g43230	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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