Co-expression analysis

Gene ID GmaAffx.29692.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g01700: chitinase, putative (HF=3e+0)
Module size 6 genes
NF 0.05
%ile 17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5071.70.93GmaAffx.29692.1.S1_atAW348396--3e+0At4g01700chitinase, putativeO.I.H.G.S.X.
0.1721.20.92GmaAffx.25060.1.S1_atCD415199--3e-1At5g47650ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)O.I.H.G.S.X.
0.0811.00.92GmaAffx.636.1.S1_atBM523305--1e+0At3g46900COPT2O.I.H.G.S.X. (SEPALLATA3)O.I.H.G.S.X. (PLANTACYANIN)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g01700, orthologous to the query gene, GmaAffx.29692.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.2726.2At4g01700828131chitinase, putativeF:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVFO.I.H.G.S.X.
0.3643.6At3g46280823773protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBOO.I.H.G.S.X.
0.2930.3At1g51850841612leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.H.G.S.X.
0.2014.4At2g19190816436FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)Receptor-like protein kinase. Involved in early defense signaling.O.I.H.G.S.X.
0.1811.4At5g64120836533peroxidase, putativeencodes a cell wall bound peroxidase that is induced by hypo-osmolarityO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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