Co-expression analysis

Gene ID	GmaAffx.29434.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g64530: RWP-RK domain-containing protein (HF=8e-1)
Module size	22 genes
NF	0.24
%ile	49.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	93.4	0.95	GmaAffx.29434.1.S1_at	BG508620	-	-	8e-1	At1g64530	RWP-RK domain-containing protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.96	GmaAffx.77294.1.S1_at	BG653324	-	-	9e-4	At5g57380	VIN3 (VERNALIZATION INSENSITIVE 3)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.96	GmaAffx.86514.1.S1_at	BG790017	-	-	1e-15	At4g23980	ARF9 (AUXIN RESPONSE FACTOR 9)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.96	Gma.8301.4.S1_at	AI416933	-	-	1e-20	At4g25800	calmodulin-binding protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.96	GmaAffx.56374.1.S1_at	BF598372	-	-	1e-27	At5g62000	ARF2 (AUXIN RESPONSE FACTOR 2)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.97	GmaAffx.58176.1.S1_at	BU577254	-	-	3e-1	At2g39540	gibberellin-regulated family protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.96	GmaAffx.66428.1.S1_at	AW132856	-	-	8e-1	At1g78430	-	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.96	GmaAffx.80892.1.S1_at	BU763661	-	-	1e-1	At4g31020	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	Gma.13263.1.A1_at	CD394450	-	-	5e-1	At2g25190	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	GmaAffx.24666.1.S1_at	CA783210	-	-	2e-1	At2g39705	RTFL8 (ROTUNDIFOLIA LIKE 8)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	GmaAffx.55541.1.S1_at	AW759258	-	-	5e-30	At5g13160	PBS1 (avrPphB susceptible 1)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	GmaAffx.15271.1.S1_at	BU760906	-	-	8e-1	At2g25180	ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.3859.2.S1_a_at	BM954966	-	-	3e+0	At3g23440	EDA6 (EMBRYO SAC DEVELOPMENT ARREST 6)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	PsAffx.psHA006iH10r_s_at	PsAffx.psHA006iH10r	-	-	1e+0	At2g28140	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.5844.3.S1_at	BU080522	-	-	2e-64	At2g40810	AtATG18c	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.97	Gma.9688.4.S1_at	BF596496	-	-	9e-67	At1g53165	ATMAP4K ALPHA1	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.97	Gma.11997.1.S1_at	BI971274	-	-	5e-7	At1g61065	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.96	GmaAffx.49350.2.S1_at	BE800855	-	-	9e-1	At3g55490	-	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.97	GmaAffx.87749.1.S1_at	BQ628223	-	-	4e-21	At5g53130	CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.97	GmaAffx.54626.1.S1_at	BG789991	-	-	4e-6	At1g67710	ARR11 (RESPONSE REGULATOR 11)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.96	GmaAffx.74306.1.S1_at	BU081121	-	-	1e-46	At4g18700	CIPK12 (CBL-INTERACTING PROTEIN KINASE 12)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.97	GmaAffx.88130.1.S1_at	BU082486	-	-	1e-17	At1g04400	CRY2 (CRYPTOCHROME 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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