Co-expression analysis

Gene ID GmaAffx.27561.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g17710: EMB1241 (embryo defective 1241) (HF=8e-1)
Module size 31 genes
NF 0.25
%ile 49.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.80.95GmaAffx.27561.1.S1_atBI321989--8e-1At5g17710EMB1241 (embryo defective 1241)O.I.H.G.S.X.
0.4867.70.97Gma.10460.1.S1_s_atBU547152plastid division regulator MinE-5e-7At1g69390ATMINE1 (Arabidopsis homologue of bacterial MinE 1)O.I.H.G.S.X.
0.3650.80.97Gma.2265.1.S1_atBM519733--1e-75At5g21070unknown proteinO.I.H.G.S.X.
0.3346.10.98Gma.8283.1.S1_atAW350369--2e-48At5g12190RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3243.70.97Gma.15812.1.S1_atAW350894--1e-13At5g03220transcriptional co-activator-relatedO.I.H.G.S.X.
0.2939.00.97GmaAffx.91914.1.S1_x_atCF807639--7e-5At1g22270unknown proteinO.I.H.G.S.X.
0.2839.00.98Gma.3704.1.S1_a_atAW348461--4e-2At1g51510Y14O.I.H.G.S.X.
0.2735.70.98Gma.3809.1.S1_atBI470582--1e-56At1g03150GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.2735.70.98Gma.582.1.S1_atCD416843--4e-8At3g18165MOS4 (Modifier of snc1,4)O.I.H.G.S.X.
0.2633.90.97Gma.18105.1.S1_atBU548122--8e-3At1g08530unknown proteinO.I.H.G.S.X.
0.2633.90.98GmaAffx.90455.1.A1_s_atCF806180--3e-26At5g12110elongation factor 1B alpha-subunit 1 (eEF1Balpha1)O.I.H.G.S.X.
0.2633.90.97Gma.4754.1.S1_atCD394174--1e-20At5g19150carbohydrate kinase familyO.I.H.G.S.X.
0.2633.90.97Gma.11837.1.S1_atBQ296775--1e-67At5g60790ATGCN1O.I.H.G.S.X.
0.2532.60.98Gma.1652.2.S1_a_atBQ454265--5e-9At5g12410THUMP domain-containing proteinO.I.H.G.S.X.
0.2532.60.98Gma.524.1.S1_atAW350155--1e-16At1g42960-O.I.H.G.S.X.
0.2430.90.98Gma.9843.1.S1_atCD398102--6e-28At1g21065unknown proteinO.I.H.G.S.X.
0.2329.90.97Gma.4666.1.S1_atBF425938--2e-32At3g07020UDP-glucose:sterol glucosyltransferase (UGT80A2)O.I.H.G.S.X.
0.2329.90.97Gma.5126.1.S1_atBI971128--1e-1At1g05770jacalin lectin family proteinO.I.H.G.S.X.
0.2126.60.98GmaAffx.44996.1.S1_atBF424052--1e+0At4g37685unknown proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.80265.1.S1_atBU761569--3e-31At1g17350auxin-induced-related / indole-3-acetic acid induced-relatedO.I.H.G.S.X.
0.2025.10.98Gma.6397.1.S1_atBU090090--1e-12At5g55125unknown proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.89071.1.S1_s_atCK605653--2e-36At1g26550peptidyl-prolyl cis-trans isomerase PPIC-type family proteinO.I.H.G.S.X.
0.1923.70.98GmaAffx.59495.1.S1_atBI471929--5e-1At3g62180invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.1923.70.98Gma.2401.1.S1_atCD418282--2e-7At5g42470-O.I.H.G.S.X.
0.1822.30.98GmaAffx.82287.1.S1_atBE440322--2e-46At5g63440unknown proteinO.I.H.G.S.X.
0.1721.20.98Gma.4682.1.S1_s_atAW306683--1e-13At3g54560HTA11O.I.H.G.S.X.
0.1619.70.98Gma.4975.1.S1_atBI970178--6e-25At5g06420zinc finger (CCCH-type/C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1619.70.96Gma.2908.1.S1_atBE658217--8e-13At1g27510-O.I.H.G.S.X.
0.1518.70.98Gma.9178.1.S1_atBU926554--1e-62At2g30000-O.I.H.G.S.X.
0.1316.30.98Gma.6112.1.S1_atAY143592.1urease accessory protein UreF-9e-9At1g21840UREF (urease accessory protein F)O.I.H.G.S.X.
0.1215.10.97Gma.4493.2.S1_atAI495926--1e+0At2g37200integral membrane protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.898.4GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.698.3GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.398.2GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
5.298.1GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.998.0GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.797.8GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.697.7GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.697.7GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.597.7GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.597.7GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.097.2GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.997.1GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.596.6GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.296.0GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.195.8GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.195.8GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.095.6GSM209577susceptible_12hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.095.6GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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