Co-expression analysis

Gene ID	GmaAffx.2741.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g10160: beta-hydroxyacyl-ACP dehydratase, putative (HF=6e-1)
Module size	21 genes
NF	0.60
%ile	89.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	0.92	GmaAffx.2741.1.A1_at	AW349557	-	-	6e-1	At5g10160	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	H.G.	S.X.	Please select
0.86	93.0	0.96	GmaAffx.73080.1.S1_at	BI427357	-	-	2e-1	At4g21620	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.85	92.8	0.97	GmaAffx.36562.2.S1_at	BM731207	-	-	5e-15	At1g14970	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.3	0.95	Gma.148.1.S1_at	BM091696	GmCK3p	-	4e-15	At1g74320	choline kinase, putative	O.I.	H.G.	S.X.	Please select
0.76	89.7	0.95	GmaAffx.55680.1.S1_at	BE475029	-	-	2e-44	At5g56750	Ndr family protein	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.96	GmaAffx.73253.1.S1_at	BI786637	-	-	3e-1	At5g56550	OXS3 (OXIDATIVE STRESS 3)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.95	GmaAffx.93590.1.S1_at	CF809315	-	-	3e-1	At2g05440	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.62	82.1	0.96	Gma.13878.1.S1_at	CD408791	-	-	5e+0	At5g01070	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.96	GmaAffx.74742.1.S1_at	CA785419	-	-	8e-1	At4g19645	-	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.96	GmaAffx.87383.1.S1_at	BM527475	-	-	6e-11	At3g54100	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.96	GmaAffx.24880.1.S1_at	CA935325	-	-	4e-6	At1g64460	phosphatidylinositol 3- and 4-kinase family protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.96	GmaAffx.76703.1.S1_at	BE191622	-	-	7e-5	At5g64510	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.97	GmaAffx.73326.2.S1_at	BF595114	-	-	4e-16	At1g80280	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.96	GmaAffx.69269.1.S1_at	BM732844	-	-	6e-11	At4g21720	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.97	GmaAffx.82262.1.S1_at	BI786890	-	-	3e-28	At3g51770	ETO1 (ETHYLENE OVERPRODUCER 1)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.96	GmaAffx.23963.1.S1_at	BQ080815	-	-	3e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.97	GmaAffx.51022.1.S1_at	BM519886	-	-	9e-1	At3g25920	RPL15	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.96	GmaAffx.40774.1.S1_at	BG363156	-	-	1e-24	At5g08080	SYP132 (SYNTAXIN OF PLANTS 132)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.96	GmaAffx.73287.1.S1_at	BI892641	-	-	9e-1	At1g70440	SRO3 (SIMILAR TO RCD ONE 3)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.39172.1.S1_at	BM094230	-	-	2e-5	At1g12340	-	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.96	GmaAffx.81178.1.S1_at	BE807325	-	-	9e-1	At1g26796	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
36.6	99.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
28.0	99.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
27.0	99.8	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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