Co-expression analysis

Gene ID GmaAffx.26700.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g29930: basic helix-loop-helix (bHLH) family protein (HF=3e+0)
Module size 6 genes
NF 0.08
%ile 24.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.95GmaAffx.26700.2.S1_atBE211421--3e+0At4g29930basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1417.50.98PsAffx.psHB012xF21f_s_atPsAffx.psHB012xF21f--9e-25At2g19520FVEO.I.H.G.S.X.
0.1013.00.98Gma.2819.2.S1_atBG510963--4e-16At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.1013.00.98GmaAffx.91918.1.S1_atCF807643--4e-149At1g56070LOS1O.I.H.G.S.X.
0.047.00.98GmaAffx.90608.1.S1_s_atCF806333--5e-102At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.035.80.98Gma.5672.9.S1_atAW781478--2e-102At1g54270EIF4A-2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.897.0GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.897.0GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.696.7GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.596.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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