Co-expression analysis

Gene ID	GmaAffx.26348.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g43050: ATPMEPCRD (HF=7e-3)
Module size	6 genes
NF	0.19
%ile	42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.70	GmaAffx.26348.1.S1_at	BE474551	-	-	7e-3	At2g43050	ATPMEPCRD	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.87	GmaAffx.26336.1.S1_at	BE473982	-	-	1e+0	At4g35060	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.87	Gma.11694.1.A1_at	AW349067	-	-	9e-1	At5g41300	receptor-like protein kinase-related	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.74	GmaAffx.42732.1.S1_at	BU765857	-	-	1e-1	At2g04240	XERICO	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.74	GmaAffx.10496.1.A1_at	BU548401	-	-	3e-4	At3g07650	COL9 (CONSTANS-LIKE 9)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.73	Gma.2062.2.S1_a_at	BF424226	-	-	2e-1	At3g06070	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.2	99.8	GSM209595	susceptible_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
20.1	99.7	GSM209594	resistant_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
16.8	99.7	GSM209576	resistant_12hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
14.4	99.6	GSM209577	susceptible_12hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
11.5	99.4	GSM209585	resistant_12hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
8.9	99.2	GSM209586	susceptible_12hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
8.1	99.0	GSM209591	mock_0hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.7	98.4	GSM209574	resistant_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.6	98.3	GSM209575	susceptible_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.2	98.1	GSM209593	susceptible_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.3	97.5	GSM209592	resistant_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.1	97.3	GSM209584	susceptible_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.0	97.2	GSM209583	resistant_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.9	97.1	GSM209573	mock_0hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1	95.8	GSM209590	susceptible_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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