Co-expression analysis

Gene ID GmaAffx.21491.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g49480: ATCP1 (Ca2+-binding protein 1) (HF=3e+0)
Module size 7 genes
NF 0.47
%ile 77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.98GmaAffx.21491.1.S1_atAW832637--3e+0At5g49480ATCP1 (Ca2+-binding protein 1)O.I.H.G.S.X.
0.5374.20.98GmaAffx.80509.1.S1_atBQ610707--2e-1At5g63520-O.I.H.G.S.X.
0.5374.20.98Gma.8643.2.S1_atBG652817--1e-9At3g09740SYP71 (SYNTAXIN OF PLANTS 71)O.I.H.G.S.X.
0.4665.50.98Gma.1752.3.S1_a_atAW569205--5e-2At4g04860DER2.2 (DERLIN-2.2)O.I.H.G.S.X.
0.4463.30.98GmaAffx.69670.1.S1_atBQ742118--7e-5At4g22670AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)O.I.H.G.S.X.
0.3040.40.98GmaAffx.91473.1.S1_atCF807198--3e-22At4g28860ckl4 (Casein Kinase I-like 4)O.I.H.G.S.X.
0.2532.60.98GmaAffx.40419.1.S1_atBF325410--1e-11At3g03570-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM29324734_C066.1P.R9P2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29413286_3112.2G.R9G1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29424492_2340.2H.R202P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29306061_C034.1N.R9N3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM2939115_2236.2E.R249P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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