Co-expression analysis

Gene ID GmaAffx.20650.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g55150: F-box family protein (HF=3e-1)
Module size 6 genes
NF 0.12
%ile 32.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.91GmaAffx.20650.1.S1_atBM093029--3e-1At5g55150F-box family proteinO.I.H.G.S.X.
0.4057.10.98Gma.8354.1.S1_atBE658968--4e-22At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.1417.50.98Gma.5103.1.S1_atBI968925--2e-59At1g80500-O.I.H.G.S.X.
0.1114.20.98Gma.6696.1.S1_atBI970794--2e-36At5g23300PYRD (pyrimidine d)O.I.H.G.S.X.
0.069.00.98GmaAffx.19843.1.S1_atBU550809--2e+0At3g60966protein binding / zinc ion bindingO.I.H.G.S.X.
0.069.00.98Gma.10782.1.S1_s_atCD410674--0At1g56070LOS1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1618278_at, orthologous to the query gene, GmaAffx.20650.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81618278_atAt5g55150--4e+0At5g53486unknown proteinO.I.H.G.S.X.
0.1819.41608726_atAt5g55150hypothetical protein LOC100258243-4e+0At5g10620-O.I.H.G.S.X.
0.1819.41621297_atAt5g55150--5e+0At4g08949unknown proteinO.I.H.G.S.X.
0.1616.71622336_atAt5g55150hypothetical protein LOC100261441-5e+0At4g29280LCR22 (Low-molecular-weight cysteine-rich 22)O.I.H.G.S.X.
0.1313.31608150_atAt5g55150--2e-3At4g32520SHM3 (SERINE HYDROXYMETHYLTRANSFERASE 3)O.I.H.G.S.X.
0.077.81609550_s_atAt5g55150hypothetical protein LOC100257178-1e-21At5g2029040S ribosomal protein S8 (RPS8A)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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