Co-expression analysis

Gene ID	GmaAffx.19767.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g14900: helicase associated (HA2) domain-containing protein (HF=1e+0)
Module size	6 genes
NF	0.51
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.84	GmaAffx.19767.1.A1_at	BU545940	-	-	1e+0	At5g14900	helicase associated (HA2) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.2534.1.S1_s_at	BI967545	Ubiquitin	-	2e-140	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.89861.1.S1_s_at	CK606562	Ubiquitin	-	3e-127	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.10800.1.S1_s_at	AW202272	-	-	3e-20	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	GmaAffx.92103.1.S1_s_at	CF806493	translationally controlled tumor-like protein	-	6e-28	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1619972_at, orthologous to the query gene, GmaAffx.19767.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	1619972_at	At5g14900	hypothetical protein LOC100263609	-	2e-1	At5g56770	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	1612922_at	At5g14900	similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3); transcription factor	-	1e+0	At1g02510	TPK4	O.I.	H.G.	S.X.	Please select
0.55	77.3	1622424_at	At5g14900	hypothetical protein LOC100265980	-	9e-11	At5g44200	CBP20 (CAP-BINDING PROTEIN 20)	O.I.	H.G.	S.X.	Please select
0.53	75.2	1608671_at	At5g14900	hypothetical protein LOC100243213	-	1e+0	At5g65609	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	1611870_at	At5g14900	hypothetical protein LOC100247177	-	8e-152	At5g09740	HAM2 (histone acetyltransferase of the MYST family 2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	1613582_at	At5g14900	hypothetical protein LOC100261825	-	6e-12	At5g14170	CHC1	O.I.	H.G.	S.X.	Please select
0.25	30.5	1616860_at	At5g14900	hypothetical protein LOC100261021	-	4e-83	At3g59920	ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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