Co-expression analysis

Gene ID	GmaAffx.19767.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g14900: helicase associated (HA2) domain-containing protein (HF=1e+0)
Module size	6 genes
NF	0.51
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.84	GmaAffx.19767.1.A1_at	BU545940	-	-	1e+0	At5g14900	helicase associated (HA2) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.2534.1.S1_s_at	BI967545	Ubiquitin	-	2e-140	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.89861.1.S1_s_at	CK606562	Ubiquitin	-	3e-127	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.10800.1.S1_s_at	AW202272	-	-	3e-20	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	GmaAffx.92103.1.S1_s_at	CF806493	translationally controlled tumor-like protein	-	6e-28	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.104576.1.A1_at, orthologous to the query gene, GmaAffx.19767.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	TaAffx.104576.1.A1_at	At5g14900	-	-	1e+0	At1g16520	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	Ta.16478.1.S1_at	At5g14900	-	-	1e+0	At3g50990	electron carrier/ heme binding / peroxidase	O.I.	H.G.	S.X.	Please select
0.55	76.8	TaAffx.29978.1.S1_at	At5g14900	-	-	4e+0	At5g20900	JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)	O.I.	H.G.	S.X.	Please select
0.52	73.7	TaAffx.106563.2.S1_at	At5g14900	-	-	1e+1	At4g19100	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	73.0	TaAffx.78823.1.S1_at	At5g14900	-	-	4e+0	At5g26840	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	Ta.7698.3.S1_at	At5g14900	-	-	2e+1	At5g60615	-	O.I.	H.G.	S.X.	Please select
0.47	67.9	TaAffx.72471.1.S1_at	At5g14900	-	-	1e+0	At2g27940	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.25810.1.A1_at	At5g14900	-	-	1e+0	At5g10310	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	TaAffx.52385.1.S1_at	At5g14900	-	-	4e+0	At1g05930	DNA binding	O.I.	H.G.	S.X.	Please select
0.42	60.9	TaAffx.57937.1.S1_at	At5g14900	-	-	7e+0	At3g26450	major latex protein-related / MLP-related	O.I.	H.G.	S.X.	Please select
0.40	58.4	TaAffx.57901.1.S1_at	At5g14900	-	-	4e+0	At3g32200	-	O.I.	H.G.	S.X.	Please select
0.39	56.1	Ta.27542.1.A1_at	At5g14900	-	-	4e-74	At3g58610	ketol-acid reductoisomerase	O.I.	H.G.	S.X.	Please select
0.39	56.1	TaAffx.71043.1.S1_at	At5g14900	-	-	2e+0	At3g53620	AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)	O.I.	H.G.	S.X.	Please select
0.39	56.1	TaAffx.52324.1.S1_at	At5g14900	-	-	1e+0	At2g21220	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.38	54.7	Ta.17218.1.S1_at	At5g14900	-	-	2e+1	At5g08260	scpl35 (serine carboxypeptidase-like 35)	O.I.	H.G.	S.X.	Please select
0.37	53.0	Ta.5770.2.S1_x_at	At5g14900	-	-	4e+0	At2g44578	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.34	48.1	TaAffx.107697.1.S1_at	At5g14900	-	-	2e+1	At5g14740	CA2 (CARBONIC ANHYDRASE 2)	O.I.	H.G.	S.X.	Please select
0.33	46.9	TaAffx.55852.1.S1_at	At5g14900	-	-	6e-1	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	O.I.	H.G.	S.X.	Please select
0.33	46.9	TaAffx.27185.1.S1_at	At5g14900	-	-	1e+0	At1g68540	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	Ta.17486.1.S1_at	At5g14900	-	-	1e+0	At2g19570	CDA1 (CYTIDINE DEAMINASE 1)	O.I.	H.G.	S.X.	Please select
0.31	42.7	TaAffx.12897.1.A1_at	At5g14900	-	-	3e-1	At3g22840	ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)	O.I.	H.G.	S.X.	Please select
0.30	40.9	TaAffx.6749.1.S1_at	At5g14900	-	-	1e+1	At1g31580	ECS1	O.I.	H.G.	S.X.	Please select
0.30	40.9	TaAffx.57999.1.S1_at	At5g14900	-	-	1e+1	At4g20380	zinc finger protein (LSD1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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