Co-expression analysis

Gene ID	GmaAffx.19737.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g20495: - (HF=2e+0)
Module size	6 genes
NF	0.16
%ile	38.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.75	GmaAffx.19737.1.S1_at	AW705178	-	-	2e+0	At2g20495	-	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.71	Gma.13860.1.A1_at	CD408049	-	-	3e+0	At5g61230	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.76	GmaAffx.76021.1.A1_at	BU546866	-	-	6e+0	At3g26900	shikimate kinase family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.80	GmaAffx.70423.1.S1_at	CA938711	-	-	8e-1	At5g57920	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.71	Gma.3980.1.S1_at	BQ453224	-	-	2e-1	At4g26310	elongation factor P (EF-P) family protein	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.71	GmaAffx.80850.1.S1_at	BE473956	-	-	4e+0	Atcg00440	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.1	99.8	GSM292386	60_1231.1F.R142U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.5	99.8	GSM292229	25_C029.1B.R9B2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.8	99.7	GSM292222	16_C029.1B.R9B2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.7	99.5	GSM292373	47_C104.1F.R9F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4	99.1	GSM292233	35_C030.1B.R9B2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9	98.5	GSM293121	35_1110.1O.R069P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM292310	58_C085.1E.SLE3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM292367	39_C108.1F.V7F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292353	22_1220.1F.R135P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292512	28_1284.1H.R180P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292377	50_1228.1F.R139P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292410	14_1254.1G.R161P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292260	7_1054.1B.R031P_new, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292309	57_C086.1E.SLE3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292276	20_C079.1E.R9E2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292243	56_C025.1B.SLB2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292752	16_1442.1K.R270P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292274	19_C089.1E.R9E3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293109	24_1143.1O.R091U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293142	54_1136.1O.R085P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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